BioMed Research International

Research Article

SAMA: A Fast Self-Adaptive Memetic Algorithm for Detecting SNP-SNP Interactions Associated with Disease

Table 5

Results of two-locus SNP-SNP interactions detected by SAMA on AMD dataset.
SNP 1GeneSNP 2Gene values
rs380390CFHrs1363688NA<1.0e-08
rs380390CFHrs2224762KDM4C
rs380390CFHrs555174NA
rs380390CFHrs1374431NA
rs380390CFHrs1740752NA
rs1329428CFHrs7467596MED27<1.0e-07
rs1329428CFHrs9328536MED27
rs1329428CFHrs3922799NA
rs1329428CFHrs10489076NA
rs1740752N/Ars3009336NA
rs380390CFHrs718263NCALD
rs380390CFHrs223607NA
rs380390CFHrs620511NA
rs380390CFHrs2178692COPS7A
rs380390CFHrs34512NA
rs380390CFHrs3853728EGFEM1P
rs380390CFHrs210758NA
rs380390CFHrs2446023ZNF518A
rs380390CFHrs2167167NA
rs380390CFHrs956275PPAT
rs380390CFHrs1896373NA<1.0e-06
rs380390CFHrs1896373NA
rs380390CFHrs143627607DDX3X
rs1329428CFHrs10504043ANK1
rs1329428CFHrs10272438BBS9
rs1329428CFHrs2695214PPP3CA
rs1329428CFHrs78812154NA
rs1329428CFHrs74412587NA
rs1329428CFHrs1363688NA
rs1329428CFHrs9328536MED27
rs1740752NArs943008NEDD9