Disease Sequences High-Accuracy Alignment Based on the Precision Medicine

Table 4

Optimal GOP/GEP/matrix.

Sequence set	Ref 1-test 1	Ref 1-test 2	Ref 1-test 3	Ref 2	Ref 3
Sequence; row	4-5	4-5	4-5	14–19	>20
Sequence; length (bp)	<100	100–300	>300	50–600	60–600
	0.03	0.05	0.08	0.02	0.02
	5	5	10	10	10
Matrix	BLOSUM45	BLOSUM45	BLOSUM62	BLOSUM45	BLOSUM45
	3
	0.2
	0.9