|
| Name of organism | Scaffold or genome length (bp) with accession number | Total number of ORF’s predicted in scaffold of complete genome | Predicted coding region for nitrilase | Number of
base-pairs |
|
Acaryochloris marina
MBIC11017 | NC_009925
(6503724 bp) | 152 | 200001–200999 | 999 |
|
Acetobacter pasteurianus
IFO 3283-32 | AP011157
(191443 bp) | 120 | 174107–173133 | 974 |
|
Achromobacter xylosoxidans
A8 | NC_014640
(7013095 bp) | 406 | 200001–200960 | 960 |
|
Acidovorax avenae avenae
ATCC 19860 | NC_015138
(5482170 bp) | 188 | 201035–200001 | 1035 |
|
Acidothermus cellulolyticus
11B | NC_008578
(2443540 bp) | 403 | 200001–201131 | 1131 |
|
Acidaminococcus fermentans
VR4 | NC_013740
(2329769 bp) | 293 | 200924–200001 | 924 |
|
Alcanivorax dieselolei
B5 | CP003466
(4928223 bp) | 343 | 200001–200981 | 981 |
|
Arthrobacter aurescens
TC1 | NC_008711
(4597686 bp) | 385 | 200001–200930 | 930 |
|
Azorhizobium caulinodans
ORS 571 | NC_009937
(5369772 bp) | 262 | 89665–88580 | 1083 |
|
Azospirillum sp.
B510 | NC_013854
(3311395 bp) | 402 | 200001–200921 | 921 |
|
Bacillus pumilus
SAFR-032 | NC_009848
(3704465 bp) | 73 | 201026–200001 | 1026 |
|
Bradyrhizobium japonicum
USDA 110 | NC_004463
(9105828 bp) | 387 | 200001–200966 | 966 |
|
Bradyrhizobium sp.
BTAi1 | NC_009485
(8264687 bp) | 392 | 201146–200001 | 1146 |
|
Bradyrhizobium sp.
ORS278 | NC_009445
(7456587 bp) | 395 | 201041–200001 | 1041 |
|
Brevibacillus brevis
NBRC 100599 | NC_012491
(6296436 bp) | 182 | 200001–200960 | 960 |
|
Flavobacterium indicum
GPTSA100-9 | HE774682
(2993089 bp) | 317 | 200001–200981 | 981 |
|
Saccharomonospora viridis
P101 | NC_013159
(4308349 bp) | 315 | 200001–200996 | 996 |
|
Sphingopyxis alaskensis
DSM13593 | NC_008048
(3345170 bp) | 387 | 200001–201017 | 1017 |
|
Burkholderia cenocepacia
J2315 | NC_011000
(3870082 bp) | 393 | 199944–201050 | 1050 |
|
Burkholderia glumae
BGR1 | NC_012720
(141067 bp) | 154 | 47491–48477 | 1017 |
|
Burkholderia gladioli
BSR3 | NC_015376
(3700833 bp) | 338 | 200001–201014 | 1014 |
|
| Burkholderia phymatum | NC_010623
(2697374 bp) | 375 | 199971–201023 | 1023 |
|
| Burkholderia phytofirmans | NC_010681
(4467537 bp) | 357 | 200001–201035 | 1035 |
|
Burkholderia sp.
CCGE1002 | NC_014119
(1282816 bp) | 280 | 72013–73041 | 1020 |
|
Burkholderia sp.
CCGE1003 | NC_014540
(2966498 bp) | 344 | 200019–201041 | 1022 |
|
| Burkholderia vietnamiensis G4 | NC_009254
(1241007 bp) | 436 | 199986–201023 | 1037 |
|
Burkholderia xenovorans
LB400 | NC_007951
(4895836 bp) | 396 | 200001–200996 | 996 |
|
| Caulobacter sp. K31 | NC_010335
(233649 bp) | 219 | 180936–181871 | 935 |
|
Chlorobium phaeobacteroides
BS1 | NC_010831
(2736403 bp) | 382 | 200001–200936 | 936 |
|
| Clostridium difficile 630 | NC_009089
(4290252 bp) | 364 | 200001–200927 | 927 |
|
Clostridium difficile
CD196 | NC_013315
(4110554 bp) | 308 | 200001–200927 | 927 |
|
Clostridium difficile
R20291 | NC_013316
(4191339 bp) | 329 | 200001–200927 | 927 |
|
Clostridium kluyveri
NBRC 12016 | NC_011837
(3896121 bp) | 442 | 200001–200930 | 957 |
|
Clostridium kluyveri
ATCC 8527 | NC_009706
(3964618 bp) | 491 | 200001–200930 | 930 |
|
Conexibacter woesei
DSM 14684 | NC_013739
(6359369 bp) | 388 | 200001–200942 | 942 |
|
Cupriavidus necator
ATCC 17699 | NC_008313
(4052032 bp) | 318 | 200001–201017 | 1017 |
|
Cupriavidus necator
ATCC 43291 | NC_015726
(3872936 bp) | 318 | 200001–201017 | 1017 |
|
Cyanobium gracile
ATCC 27147 | Cyagr_Contig81
(3342364 bp) | 405 | 200001–200999 | 999 |
|
Deinococcus deserti
(strain VCD115) | NC_012529
(314317 bp) | 269 | 200001–200951 | 951 |
|
Deinococcus peraridilitoris
DSM 19664 | Deipe_Contig72.1
(3881839 bp) | 412 | 200001–200951 | 951 |
|
Desulfomonile tiedjei
ATCC 49306 | Desti_Contig107.1
(6500104 bp) | 379 | 200001–201029 | 1029 |
|
| Dickeya zeae Ech1591 | NC_012912
(4813854 bp) | 194 | 200001–200927 | 927 |
|
| Erwinia billingiae Eb661 | NC_014305
(169778 bp) | 194 | 87964–88965 | 1001 |
|
Erythrobacter litoralis
HTCC2594 | NC_007722
(3052398 bp) | 411 | 200001–200969 | 969 |
|
Flavobacterium indicum
DSM 17447 | HE774682
(2993089 bp) | 317 | 200001–200981 | 981 |
|
Frateuria aurantia
ATCC 33424 | Fraau_Contig24.1
(3603458 bp) | 366 | 200001–200924 | 924 |
|
Geobacillus sp.
Y4.1MC1 | NC_014650
(3840330 bp) | 434 | 200001–200966 | 966 |
|
Geobacillus thermoglucosidasius
C56-YS93 | NC_015660
(3893306 bp) | 446 | 200001–200966 | 966 |
|
Geodermatophilus obscurus
DSM 43160 | NC_013757
(5322497 bp) | 244 | 54102–54884 | 783 |
|
Gluconacetobacter diazotrophicus
ATCC 49037 | NC_010125
(3944163 bp) | 333 | 200001–200960 | 960 |
|
Haliangium ochraceum
DSM 14365 | CP002175
(2309262 bp) | 377 | 200001–200957 | 957 |
|
Halanaerobium praevalens
ATCC 33744 | NC_013440
(9446314 bp) | 262 | 200001–200999 | 999 |
|
Hyphomicrobium sp.
MC1 | NC_015717
(4757528 bp) | 392 | 200001–200984 | 984 |
|
Janthinobacterium sp.
Marseille | NC_009659
(4110251 bp) | 398 | 200001–201068 | 1068 |
|
Jannaschia sp.
CCS1 | NC_007802
(4317977 bp) | 382 | 200001–201026 | 1026 |
|
Maricaulis maris
MCS10 | NC_008347
(3368780 bp) | 392 | 200001–200933 | 933 |
|
| Methylobacterium extorquens CM4 | NC_011758
(380207 bp) | 211 | 7191–8267 | 1077 |
|
Methylobacterium extorquens
ATCC 14718 | NC_012811
(1261460 bp) | 436 | 200001–201077 | 1077 |
|
| Methylobacterium extorquens DM4 | NC_012988
(5943768 bp) | 378 | 200001–200918 | 918 |
|
| Methylobacterium extorquens PA1 | NC_010172
(5471154 bp) | 354 | 200001–201110 | 1110 |
|
Methylomonas methanica
MC09 | Contig38
(5051681 bp) | 402 | 200001–200996 | 996 |
|
| Methylobacterium nodulans ORS2060 | NC_011892
(487734 bp) | 425 | 200001–201116 | 1116 |
|
Methylobacterium populi
ATCC BAA-705 | NC_010725
(5800441 bp) | 193 | 61617–62693 | 1077 |
|
| Methylibium petroleiphilum PM1 | NC_008825
(4044195 bp) | 364 | 200001–201074 | 1074 |
|
Methylobacterium radiotolerans
ATCC 27329 | NC_010505
(6077833 bp) | 377 | 200001–201077 | 1077 |
|
Methylocella silvestris
BL2 | NC_011666
(4305430 bp) | 439 | 199971–201029 | 1029 |
|
Mycobacterium intracellulare
ATCC 13950 | CP003322
(5402402 bp) | 383 | 199938–200897 | 897 |
|
Mycobacterium liflandii
128FXT | CP003899
(6208955 bp) | 405 | 200001–201059 | 1059 |
|
| Mycobacterium rhodesiae NBB3 | MycrhN_Contig54.1
(6415739 bp) | 267 | 200001–200957 | 957 |
|
Mycobacterium smegmatis
ATCC 700084 | CP001663
(6988208 bp) | 377 | 200001–200978 | 978 |
|
Natranaerobius thermophilus
ATCC BAA-1301 | NC_010718
(3165557 bp) | 387 | 200001–200930 | 930 |
|
Nocardia farcinica
IFM 10152 | NC_006361
(6021225 bp) | 390 | 198993–199811 | 818 |
|
Nocardiopsis dassonvillei
DSM 43111 | NC_014211
(775354 bp) | 353 | 201134–200001 | 843 |
|
Oligotropha carboxidovorans
ATCC 49405 | CP002826
(3595748 bp) | 372 | 200001–201065 | 1065 |
|
| Pantoea sp. At-9b | NC_014839
(394054 bp) | 349 | 114577–115581 | 1005 |
|
Peptoniphilus duerdenii
ATCC BAA-1640 | NZ_AEEH01000050
(96694 bp) | 80 | 52942–53863 | 921 |
|
Photorhabdus asymbiotica
ATCC 43949 | NC_012962
(5064808 bp) | 338 | 200001–201050 | 1050 |
|
Pirellula staleyi
ATCC 27377 | NC_013720
(6196199 bp) | 338 | 200001–200909 | 909 |
|
Polaromonas naphthalenivorans
CJ2 | NC_008781
(4410291 bp) | 389 | 200001–201041 | 1062 |
|
| Polaromonas sp. JS666 | NC_007948
(5200264 bp) | 398 | 200001–200942 | 942 |
|
Pseudomonas syringae pv. lachrymans
M302278PT | Lac106_115287.20
(115287 bp) | 107 | 47704–48747 | 1043 |
|
Pseudoalteromonas atlantica
ATCC BAA-1087 | NC_008228
(5187005 bp) | 397 | 200001–200921 | 921 |
|
Pseudomonas aeruginosa
P7-L633/96 | Ga0060317_132
(369634 bp) | 270 | 91986–92801 | 816 |
|
Pseudomonas brassicacearum
NFM421 | NC_015379
(6843248 bp) | 377 | 200001–201026 | 1026 |
|
| Pseudomonas sp. TJI-51 | AEWE01000051
(6502 bp) | 05 | 1482–2498 | 1017 |
|
Pseudomonas fluorescens
Pf-5 | NC_007492
(6438405 bp) | 349 | 200001–200924 | 924 |
|
Pseudomonas fluorescens
SBW25 | NC_012660
(6722539 bp) | 376 | 200043–200930 | 888 |
|
Pseudomonas mendocina
NK-01 | NC_015410
(5434353 bp) | 376 | 200001–200883 | 883 |
|
Pseudomonas syringae
pv. tomato DC 3000 | PSPTOimg_DC3000
(6397126 bp) | 377 | 200001–201011 | 1011 |
|
Pseudomonas syringae
pv. syringae B728a | NC_007005
(6093698 bp) | 196 | 8233–9231 | 999 |
|
| Pseudoxanthomonas suwonensis11-1 | NC_014924
(3419049 bp) | 362 | 200001–200885 | 885 |
|
Pseudonocardia dioxanivorans
ATCC 55486 | CP002593
(7096571 bp) | 386 | 200001–201008 | 1008 |
|
Ralstonia solanacearum
GMI1000 | NC_003295
(3716413 bp) | 343 | 200001–201032 | 1032 |
|
Rhizobium hainanense
CCBAU 57015 | Ga0061100_113
(148344 bp) | 146 | 61240–62280 | 1040 |
|
| Rhizobium leguminosarum bv. Viciae 3841 | NC_008380
(5057142 bp) | 397 | 200001–201047 | 1047 |
|
Rhizobium leguminosarum bv. trifolii
WSM1325 | NC_012850
(4767043 bp) | 210 | 18450–19442 | 993 |
|
Rhodopseudomonaspalustris
TIE-1 | NC_011004
(5744041 bp) | 387 | 199980–201050 | 1070 |
|
Rhodopseudomonas palustris
DX-1 | NC_014834
(5404117 bp) | 390 | 200001–200954 | 954 |
|
Rubrobacter xylanophilus
DSM 9941 | NC_008148
(3225748 bp) | 385 | 200001–201080 | 1080 |
|
Ruegeria pomeroyi
ATCC 700808 | NC_006569
(491611 bp) | 308 | 118859–119893 | 1035 |
|
Runella slithyformis
ATCC 29530 | Unknown
(6568739 bp) | 362 | 200001–200933 | 933 |
|
Saccharothrix espanaensis
ATCC 51144 | HE804045
(9360653 bp) | 347 | 200001–201020 | 1020 |
|
| Saccharomonospora viridis ATCC 15386 | NC_013159
(4308349 bp) | 315 | 200001–200996 | 996 |
|
Shewanella halifaxensis
HAW-EB4 | NC_010334
(5226917 bp) | 337 | 200001–200945 | 945 |
|
Shewanella pealeana
ATCC 700345 | NC_009901
(5174581 bp) | 333 | 200001–200945 | 945 |
|
Shewanella sediminis
HAW-EB3 | NC_009831
(5517674 bp) | 337 | 200001–200954 | 954 |
|
Shewanella violacea
JCM 1017 | NC_014012
(4962103 bp) | 307 | 200001–200936 | 936 |
|
Shewanella woodyi
ATCC 51908 | NC_010506
(5935403 bp) | 327 | 200001–201005 | 1005 |
|
Shimwellia blattae
ATCC 29907 | EBLc (4158725 bp) | 376 | 200001–201029 | 1029 |
|
Singulisphaera acidiphila
ATCC 1392 | Sinac_Contig49.1
(9629675 bp) | 337 | 200001–201014 | 1014 |
|
| Sorangium cellulosum Soce56 | NC_010162
(13033779 bp) | 329 | 200001–201029 | 1029 |
|
Sphingopyxis alaskensis
DSM 13593 | NC_008048
(3345170 bp) | 387 | 200001–201017 | 1016 |
|
Sphaerobacter thermophilus
DSM 20745 | NC_013524
(1252731 bp) | 335 | 200097–201092 | 995 |
|
Sphingomonas wittichii
RW1 | NC_009511
(5382261 bp) | 354 | 200001–201026 | 1026 |
|
Spirosoma linguale
ATCC 33905 | NC_013730
(8078757 bp) | 339 | 200001–200906 | 906 |
|
Starkeya novella
ATCC 8093 | NC_007604
(2695903 bp) | 402 | 200001–201005 | 1005 |
|
| Streptomyces albus J1074 | CP004370
(6841649 bp) | 252 | 1635309–1636256 | 948 |
|
Synechococcus elongatus
PCC 7942 | NC_007604
(2695903 bp) | 402 | 200001–201005 | 1005 |
|
Syntrophobacter fumaroxidans
DSM 10017 | NC_008554
(4990251 bp) | 337 | 200001–200987 | 987 |
|
Synechococcus sp.
ATCC 27264 | NC_010475
(3008047 bp) | 431 | 200001–201008 | 1008 |
|
Synechococcus elongatus
PCC 6301 | NC_006576
(2696255 bp) | 402 | 200001–201005 | 1005 |
|
Synechococcus sp.
PCC 7002 | NC_010475
(3008047 bp) | 431 | 200001–201008 | 1008 |
|
Synechococcus sp.
WH8102 | NC_005070
(2434428 bp) | 537 | 200001–201017 | 1017 |
|
| Synechocystis sp. | CP003265
(3569561 bp) | 371 | 200001–201026 | 1026 |
|
Synechocystis sp.
PCC 6803 | NC_017052
(3570103 bp) | 374 | 200001–201026 | 1026 |
|
Terriglobus roseus
KBS 63 | Terro_Contig51.1
(5227858 bp) | 354 | 200001–200873 | 873 |
|
Tistrella mobilis
KA081020-065 | CP003239
(1126962 bp) | 379 | 200001–201077 | 1077 |
|
| Variovorax paradoxus (strain EPS) | NC_014931
(6550056 bp) | 360 | 200001–201035 | 1035 |
|
Variovorax paradoxus
S110 | NC_012791
(5626353 bp) | 420 | 200001–201053 | 1053 |
|
| Verminephrobacter eiseniae EF01-2 | NC_008786
(5566749 bp) | 337 | 200001–200987 | 1020 |
|
Zobellia galactanivorans
DSM 12802 | FG20DRAFT
(5340688 bp) | 331 | 200001–200951 | 951 |
|
Zymomonas mobilis subsp. Mobilis
ATCC 10988 | NZ_ACQU01000006
(113352 bp) | 113 | 82520–83509 | 990 |
|
