Review Article

Alterations in Immune-Related Defensin Alpha 4 (DEFA4) Gene Expression in Health and Disease

Table 1

List of studies that indicated an alteration in DEFA4 gene expression in respiratory-related diseases, periodontitis, liver-related diseases, autoimmune diseases.

ReferencesDiseasesStudy aimResearch contribution

[53]Hepatitis B virus (HBV)To identify the possible causes and pathogenesis of hepatitis B-related acute chronic liver failure (HBV-ACLF); the analysis of the transcriptome of PBMCs has been applied.DEFA4 gene was indicated as one of the genes that could serve as a potential biomarker for HBV-ACLF detection.

[54]Hepatitis B virus (HBV)Analysis of the transcriptome of PBMCs to recognize the gene expression pathways that failed to trigger effective immune response after a hepatitis B vaccination.DEFA4 gene was up-regulated in the non-responders.

[56]Hepatitis C virus (HCV)Gene expression profiles were examined on peripheral blood samples from liver transplant recipients with HCV (n = 6) before and after the seven-day liver transplantationDEFA4 was detected to be one of the 97 up-regulated genes (>2-fold) in liver transplant recipients with HCV seven days after liver transplantation compared with before transplantation

[57]Hepatitis E virus (HEV)RNAseq analysis was applied to understand the causes of HEV in:
-Pregnant women (PR) at their 2nd and 3rd trimesters at two-phase acute and subclinical phases.
-Non-pregnant women (NPR) also with two phases acute and convalescent, all compared with healthy subjects.
The result indicated that there was no presence of DEFA4 in NPR women at all phases while it was up-regulated in all phases for PR women.

[67]AsthmaTo determine the differences between asthma and non-asthma groups, as well as stratify potential subgroups depending on gene expression of blood samples.DEFA4 was one of the genes that showed significantly higher gene expression in patients with severe asthma compared with healthy individuals.

[68]AsthmaThis study aimed to distinguish between different phenotypes of asthma in children through examining gene expression profiles of PBMCs.(i) DEFA4 was identified as one of the 19 up-regulated genes in neutrophil-predominant asthma compared with other asthma phenotypes.
(ii) 40% of non-responders to corticosteroid treatment were suffering neutrophil-predominant asthma.

[69]Idiopathic pulmonary fibrosis (IPF)In this study, gene expression profile analysis of blood samples was performed to identify biomarkers that would enable determining the severity and monitoring the progression of IPF.DEFA4 was reported as one of 13 differentially expressed genes that can distinguish between mild and severe IPF cases, wherein DEFA4 was up-regulated in severe cases.

[70]Idiopathic pulmonary fibrosis (IPF)This study aimed to examine the gene expression profiles from blood samples of IPF patients compared to controls at the baseline and longitudinal follow-up after (1, 3, 6) months as well as one year (if alive) to monitor changes in the gene expression over time.DEFA4 was one of the top up-regulated genes in IPF subjects versus controls.
-Moreover, DEFA4 was one of the most significant genes that showed higher expression in IPF patients over 12 months.

[59]Coronavirus disease 2019 (COVID-19)Multi-omic analysis was conducted on blood samples of COVID-19-positive patients (n = 102) and COVID-19-negative patients (n = 26) to provide insight into COVID-19 pathophysiology and prediction of its severity.Increased DEFA4 expression was reported as one of 219 molecular features that significantly correlated to COVID-19 status and severity.

[73]PeriodontitisIn order to understand the pathogenic process in periodontitis, by RT-qPCR, the expression levels of several AMPs genes were measured in gingival smears from 12 patients with moderate or severe chronic periodontitis and 11 healthy subjects.(i) DEFA4 was one of three genes identified to be associated with periodontal health. DEFA4 was observed to be down-regulated in the periodontitis patients compared with healthy controls.
(ii) Moreover, a significant positive correlation was recorded between the expression level of the DEFA4 gene and the presence of Porphyromonas gingivalis and Parvimonas micra.

[74]Systemic lupus erythematos-us (SLE)This study suggests that the low-density granulocytes (LDGs) have a substantial role in the pathogenesis of lupus erythematosus through the comparison with autologous normal-density neutrophils and control neutrophils.DEFA4 gene was among the genes found to be up-regulated in LDGs.

[75]Systemic autoimmune diseases (SAID)RNA microarray analysis has been applied to indicate the gene expression in PMBC from 20 monozygotic twin pairs discordant for multiple SAID as well as 40 unrelated control subjects.DEFA4 gene was noticed to be up-regulated in subjects with SAID compared to unrelated, matched controls.