International Journal of Genomics / 2017 / Article / Tab 1

Research Article

Enriching Genomic Resources and Marker Development from Transcript Sequences of Jatropha curcas for Microgravity Studies

Table 1

Summary statistics of the transcript sequence reads assembly.

Raw sequenceAssembled contigs (Newbler)UASs (>100 bp) (Newbler + CD-HIT)Contigs (>100 bp)
(Newbler + CD-HIT)

Number of sequences1,714,43327,897115,61120,624
Min length401100100
Max length95611,92911,92911,929
Median length4648394911168.5
Average length441.21082.2621.01380.9
N252,4811,4352,554
N501,6795561,746
N751,0364711,150
N90607396751
GC%41.6740.4539.5440.56

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