Enriching Genomic Resources and Marker Development from Transcript Sequences of Jatropha curcas for Microgravity Studies

Table 1

Summary statistics of the transcript sequence reads assembly.

	Raw sequence	Assembled contigs (Newbler)	UASs (>100 bp) (Newbler + CD-HIT)	Contigs (>100 bp); (Newbler + CD-HIT)
Number of sequences	1,714,433	27,897	115,611	20,624
Min length	40	1	100	100
Max length	956	11,929	11,929	11,929
Median length	464	839	491	1168.5
Average length	441.2	1082.2	621.0	1380.9
N25	—	2,481	1,435	2,554
N50	—	1,679	556	1,746
N75	—	1,036	471	1,150
N90	—	607	396	751
GC%	41.67	40.45	39.54	40.56