Research Article

De Novo Transcriptome Sequencing of the Orange-Fleshed Sweet Potato and Analysis of Differentially Expressed Genes Related to Carotenoid Biosynthesis

Table 1

Length distribution of assembled contigs, transcripts, and unigenes from Weiduoli and HVB-3.

Length rangeContigTranscriptUnigene

0–300 1,531,538 (98.36%)16,317 (28.00%) 12,325 (34.32%)
300–500 12,342 (0.79%) 16,504 (28.32%) 10,710 (29.83%)
500–1000 9,349 (0.60%) 16,921 (29.04%) 8,813 (24.54%)
1000–2000 3,419 (0.22%) 7,635 (13.10%) 3,671 (10.22%)
2000+ 353 (0.02%) 900 (1.54%) 390 (1.09%)
Total number 1,557,001 58,277 35,909
Total length 91,371,759 34,741,399 19,150,802
Mean length 58596533
N50 length 58 767 669