Research Article

RECORD: Reference-Assisted Genome Assembly for Closely Related Genomes

Table 2

Assembly of real experimental reads (contigs).

Species Number Experimental reads Length (Mb) # ctgs Cov

A. thaliana A.1 [SRR402840, SRR402839] 113.2 250148 19464 39.6x
A.2 [SRR402842, SRR402841] 112.4 296438 18916 24.4x
A.3 [SRR402844, SRR402843] 113.1 243375 20494 30.5x

D. melanogaster D.1 [SRR066834, SRR066831] 122.6 460842 58648 2.6x
D.2 [SRR066835, SRR066832] 122.6 461044 58535 2.1x
D.3 [SRR066836, SRR066833] 122.6 460200 58415 2.4x

S. pombe P.1 [SRR948260, SRR948250] 15.2 10384 8934 32.3x
P.2 [SRR948261, SRR948251] 12.2 8129 11132 18.3x
P.3 [SRR948262, SRR948252] 12.1 8571 6696 26.5x
P.4 [SRR948266, SRR948272] 12.1 7589 10144 21.5x
P.5 [SRR948267, SRR948273] 12.0 9214 4927 31.6x
P.6 [SRR948268, SRR948274] 12.0 8964 5696 28.1x
P.7 [SRR948269, SRR948275] 12.1 8269 8918 27.4x