Research Article
RECORD: Reference-Assisted Genome Assembly for Closely Related Genomes
Table 2
Assembly of real experimental reads (contigs).
| Species | Number | Experimental reads | Length (Mb) | # ctgs | | Cov |
| A. thaliana | A.1 | [SRR402840, SRR402839] | 113.2 | 250148 | 19464 | 39.6x | A.2 | [SRR402842, SRR402841] | 112.4 | 296438 | 18916 | 24.4x | A.3 | [SRR402844, SRR402843] | 113.1 | 243375 | 20494 | 30.5x |
| D. melanogaster | D.1 | [SRR066834, SRR066831] | 122.6 | 460842 | 58648 | 2.6x | D.2 | [SRR066835, SRR066832] | 122.6 | 461044 | 58535 | 2.1x | D.3 | [SRR066836, SRR066833] | 122.6 | 460200 | 58415 | 2.4x |
| S. pombe | P.1 | [SRR948260, SRR948250] | 15.2 | 10384 | 8934 | 32.3x | P.2 | [SRR948261, SRR948251] | 12.2 | 8129 | 11132 | 18.3x | P.3 | [SRR948262, SRR948252] | 12.1 | 8571 | 6696 | 26.5x | P.4 | [SRR948266, SRR948272] | 12.1 | 7589 | 10144 | 21.5x | P.5 | [SRR948267, SRR948273] | 12.0 | 9214 | 4927 | 31.6x | P.6 | [SRR948268, SRR948274] | 12.0 | 8964 | 5696 | 28.1x | P.7 | [SRR948269, SRR948275] | 12.1 | 8269 | 8918 | 27.4x |
|
|