An Immunoinformatics Study to Predict Epitopes in the Envelope Protein of SARS-CoV-2

Figure 6

(Left) docking sites of predicted peptide against selected MHC-II (1AQD) receptor. HLAs are shown in ribbon (green) form and epitope is shown in stick (blue). (Right) interacting residues between ligand and receptor. H-bond interaction is shown in green colour. (a) VLLFLAFVV-1AQD; (b) FLAFVVFLL-1AQD; (c) LLVTLAILT-1AQD; (d) LAILTALRL-1AQD; (e) YVYSRVKNL-1AQD.

(a)

(b)

(c)

(d)

(e)