Biotechnology Research International

Research Article

Cloning, Sequencing, and In Silico Analysis of -Propeller Phytase Bacillus licheniformis Strain PB-13

Table 4

Distribution of commonly observed motifs in different BPPhy protein sequences along with their functional domains.
Motifs Motif width Motif present in number of sequence Amino acid sequence Conserved region for degenerate primers Domain
1 29 44 DDPAIWVHPHDPEKSRIIGTNKKSGLAVY DDPAIW VI HN PK DN P ESA KS Phytase superfamily
2 30 43 QIEGCVADDEYGYMYIAEEQHCIWKYYAEP AV DDE YL GY LIV Y Phytase superfamily
3 24 43 GYLMVSSQGNNSYAIYERQGNNRY GY LI IL AV SSQ Local conserved
4 30 33 IDGTSETDGIDVMGFGLGPKFPHGIFVAQD IDG TV S DE TS DGIDV Local conserved
5 33 21 EVYGFCLYHSQKTGKFYAMVTGKEGEFEQYELF EVYGFSLYHS QL KTGK FY YA LM V TL GKEGEFEQYELF Local conserved
6 16 44 RMNNVDVRYGFPLNGK NNVD VLI RY GD F Local conserved
7 21 44 FDGEHFTADHEGLTIYYGPDG GEH LF TAD IV EG LI Local conserved
8 29 22 GENMDHGQKVNQNFKMVPWERIAQHFPRP K AV NQNFK IM V Local conserved
9 15 43 KIDIAAATNRSTNKI K VIT D IL A AV AV TS NE RST NG KT ILV Local conserved
10 15 42 GQITGKLVREFKMWS G KQ VI T GA KT LK VR EK F KG Local conserved