Research Article
The SARS-CoV-2 UTR’s Intrudes Host RBP’s and Modulates Cellular Splicing
Table 2
CatRAPID profiling suggests that various RBPs interact with UTRs. 3′UTR catRAPID profile: list of RBPs interacting with SARS-CoV-2 3′UTRs.
| Sr no. | Protein | Z-score | Discriminative power (%) | Interaction strength (%) | Domains | Motifs |
| 1 | GAR1 | −0.23 | 40 | 88 | Yes | No | 2 | IF1AX | −0.20 | 42 | 78 | Yes | No | 3 | RL34 | −0.25 | 37 | 78 | Yes | No | 4 | CSDC2 | −0.34 | 32 | 69 | Yes | No | 5 | CHSP1 | −0.32 | 32 | 65 | Yes | No | 6 | RALY | −0.30 | 33 | 61 | Yes | No | 7 | RS16 | −0.39 | 26 | 55 | Yes | No | 8 | DPPA5 | −0.39 | 26 | 55 | Yes | No | 9 | RL24 | −0.45 | 22 | 54 | Yes | No | 10 | PM14 | −0.37 | 28 | 53 | Yes | No | 11 | LSM1 | −0.37 | 28 | 52 | Yes | No | 12 | FBRL | −0.34 | 32 | 49 | Yes | No | 13 | SRP19 | −0.42 | 24 | 48 | Yes | No | 14 | LN28A | −0.45 | 22 | 48 | Yes | No | 15 | RM23 | −0.48 | 22 | 46 | Yes | No | 16 | RS19 | −0.44 | 22 | 45 | Yes | No | 17 | CPSF5 | −0.54 | 17 | 43 | Yes | No | 18 | RLA2 | −0.48 | 22 | 38 | Yes | No | 19 | MGN2 | −0.51 | 20 | 37 | Yes | No | 20 | MGN | −0.52 | 20 | 34 | Yes | No |
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