Research Article
The SARS-CoV-2 UTR’s Intrudes Host RBP’s and Modulates Cellular Splicing
Table 1
List of primers used in study.
| Name | Purpose | Target | Figure | Primer | Sequence (5′-3′) |
| SARS-CoV-2 5′ UTR | Cloning, overexpression validation | 5′UTR | 1, 3 | F | TAAGCAGCTAGCATTAAAGGTTTATACCTTCCCA | R | TAAGCAAAGCTTCTTACCTTTCGGTCACACC |
| SARS-CoV-2 3′ UTR | Cloning, overexpression validation | 3′UTR | 1, 3 | F | TAAGCAGCTAGCCAATCTTTAATCAGTGTGTAAC | R | AAGCAAAGCTTGTCATTCTCCTAAGAAGCT |
| MORC3 | Splicing assay | E: 4-5 | 2(a), 2(b) | F | GGAGCATGTTGTTGTTCCAA | R | ATGATCCTCGTCCCCTTCTT |
| THOC2 | Splicing assay | E: 34-35-36 | 2(a), 2(b) | F | GAGTCCAGGCATGATAAAGAAAA | R | CTGTGCTTGTCCGAGGACTT |
| HNRNPLL1 | Splicing assay | E:5-6 | 2(a), 2(b) | F | TGGCAAAGTGCAACGTATTG | R | TTCTTGGGTAGGGTGTTGAAA |
| DDX54 | Splicing assay | E:18-19 | 1 | F | GGGACAGTCAGGACAGGAAG | R | GCTCCTGCTGAAGCTCCTC |
| CRNKL1 | Splicing assay | E: 6-7-8 | 2(a), 2(b) | F | TGGAGGAAATGTTGGGAAAC | R | TTCTTCAAAGCGGGCATACT |
| Beta actin | Normalization | | 2(a), 2(b) | F | AGAAAATCTGGCACCACACC | R | CTCCTTAATGTCACGCACGA |
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