Advances in Bioinformatics / 2014 / Article / Tab 4

Research Article

Multiplex Degenerate Primer Design for Targeted Whole Genome Amplification of Many Viral Genomes

Table 4

Number of nontarget amplicons predicted in a multiplex reaction of tiled primers for 10 kb amplicons. As in Table 3, but for the multiplexes of the 10 kb-amplicon tiled primers.

OrganismNontarget amplicons/total ampliconsNontarget amplicon source organism

CCHF_S0/160
CCHF_M0/261
CCHF_L0/253
RVF_S0/137
RVF_M0/487
RVF_L0/195
Ebola0/534
Marburg0/123
Hendra0/50
Nipah0/74
Junin_L0/12
Machupo_L0/7
Junin_S0/95
Machupo_S0/32
JEV0/1554
NW_Arena_S1/337Human chromosome 14 BAC C-2555K7 of library CalTech-D
NW_Arena_L0/86
OW_Arena_S0/316
OW_Arena_L0/131
TBEV0/189

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