Research Article
Antiproliferative Efficacy of Kaempferol on Cultured Daudi Cells: An In Silico and In Vitro Study
Table 2
Protein-Ligand Interaction Profiler results of different time intervals of MD simulation of hGCN5-Kaempferol complex.
| Time intervals (ps) | Hydrophobic interactions | Hydrogen bonds | Water bridges | π-stacking | Amino acids residue | Distance | Amino acids residue | Distance | Amino acids residue | Distance | Amino acids residue | Distance |
| 0 | Tyr 621 | 3.65 | Cys 579 | 1.80 | Val 581 | 3.76 | Tyr 621 | 3.95 | Val 587 | 1.89 | Val 518 | 3.00 | Tyr 621 | 4.81 | | | Gly 589 | 2.11 | | | | | | |
| 100 | Leu 531 | 3.72 | Asp 615 | 2.16 | Gly 591 | 3.72 | Tyr 621 | 3.74 | Tyr 617 | 3.89 | Asp 615 | 1.59 | | | | | Ala 618 | 3.58 | | | | | | | Phe 622 | 3.68 | | | | | | |
| 200 | Leu 531 | 3.21 | Asp 615 | 2.11 | Val 581 | 3.17 | Tyr 621 | 4.02 | Tyr 617 | 3.94 | Asp 615 | 2.54 | Gln 586 | 2.76 | | | Ala 618 | 3.67 | Tyr 617 | 3.30 | | | | | Phe 622 | 3.94 | | | | | |
| 300 | Ala 618 | 3.36 | Cys 579 | 1.75 | Arg 533 | 3.42 | Tyr 621 | 6.39 | Tyr 617 | 3.70 | Asp 615 | 2.00 | Cys 579 | 3.43 | Phe 622 | 5.30 | Phe 622 | 3.65 | Asp 615 | 1.56 | Val 581 | 3.71 | | | | | | Val 581 | 3.59 | | |
| 400 | Asp 615 | 3.90 | Cys 579 | 3.30 | Val 581 | 3.66 | Tyr 621 | 3.85 | Ala 618 | 3.36 | Cys 579 | 1.65 | | | | | Phe 622 | 3.58 | Asp 615 | 2.72 | | | | | | Asp 615 | 1.60 | | | | |
| Average | Ala 618 | 3.26 | Asp 615 | 3.16 | | | Tyr 621 | 3.78 | Tyr 621 | 3.63 | Asp 615 | 2.13 | | | Tyr 621 | 3.73 | Phe 622 | 3.75 | Asp 615 | 2.25 | | | | |
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